STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22074.1Putative carboxypeptidase; Truncated CDS. (372 aa)    
Predicted Functional Partners:
EFL22075.1
Putative Xaa-Pro dipeptidyl-peptidase (X-Prodipeptidyl-peptidase) (X-prolyl-dipeptidyl aminopeptidase) (X-PDAP).
 
     0.850
EFL22073.1
Choline/carnitine/betaine transporter; Belongs to the BCCT transporter (TC 2.A.15) family.
       0.802
era
GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
  
 
 0.742
EFL20949.1
Extracellular small neutral protease (Snapalysin).
   
 0.719
EFL22746.1
Trypsin (SET).
   
 0.719
EFL26939.1
Trypsin (SGT).
   
 0.719
EFL22046.1
LigA protein; Belongs to the serpin family.
     
 0.706
rpsE
Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
    
  0.693
EFL26422.1
Putative integral membrane protein.
       0.605
EFL25111.1
Conserved hypothetical protein.
  
     0.581
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.