STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22091.1Sporulation and cell division protein SsgA. (138 aa)    
Predicted Functional Partners:
EFL21805.1
Helix-turn-helix domain-containing protein.
  
   
 0.753
EFL23426.1
Conserved hypothetical protein.
  
     0.703
EFL26799.1
Conserved hypothetical protein.
  
     0.633
EFL22090.1
Sigma-70 region 2 subfamily; Belongs to the sigma-70 factor family.
 
     0.622
EFL27133.1
Putative transcriptional regulator.
  
     0.614
nfi
Deoxyribonuclease V; DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA.
       0.605
EFL22089.1
Putative oxidoreductase (putative secreted protein).
       0.605
EFL26103.1
stearoyl-CoA 9-desaturase.
       0.605
EFL26627.1
ABC transporter, ATP-binding protein.
       0.605
EFL26848.1
Putative methyltransferase.
  
     0.595
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.