STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22094.1Vegetative cell wall protein gp1 (Hydroxyproline-rich glycoprotein 1). (699 aa)    
Predicted Functional Partners:
EFL24232.1
Acetoin utilization protein AcuC.
    
  0.759
EFL26547.1
Superoxide dismutase, copper/zinc binding.
   
 
 0.744
EFL24481.1
Conserved hypothetical protein; Truncated CDS.
  
    0.699
rpsJ
Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
   
   0.622
EFL22096.1
Hypothetical protein.
   
  0.619
EFL23567.1
Conserved hypothetical protein.
  
     0.602
rplN
Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
    
   0.592
EFL21964.1
Putative helix-turn-helix domain protein.
    
  0.591
EFL24961.1
Putative helix-turn-helix domain protein.
    
  0.591
EFL20483.1
Oxidoreductase, FAD-binding.
    
  0.590
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.