STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22104.1GntR family transcriptional regulator. (242 aa)    
Predicted Functional Partners:
EFL27935.1
GntR family transcriptional regulator.
  
     0.770
EFL20920.1
GntR family transcriptional regulator.
  
     0.767
EFL28013.1
Transcriptional regulator, GntR family/UbiC transcription regulator.
  
     0.710
EFL26910.1
Putative regulatory protein KorSA, GntR-family transcriptional regulator.
  
     0.694
EFL24103.1
Putative transcriptional regulator, GntR family.
  
     0.664
EFL22106.1
3-carboxy-cis,cis-muconate cycloisomerase.
 
     0.644
EFL22103.1
LigA protein.
       0.592
EFL22105.1
C4-dicarboxylate transporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
       0.568
EFL29383.1
Putative GntR-family transcriptional regulatory protein.
  
     0.516
EFL25168.1
N-acetylglucosamine-6-phosphate deacetylase.
 
  
 0.515
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.