STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22120.1Conserved hypothetical protein. (168 aa)    
Predicted Functional Partners:
EFL24797.1
N- superfamily bifunctional DNA primase/polymerase.
       0.603
EFL24522.1
Putative cupin domain protein.
  
     0.574
EFL26297.1
Conserved hypothetical protein.
  
     0.553
EFL22121.1
Citrate-binding protein.
       0.523
EFL20415.1
Putative transcriptional regulator.
  
     0.493
EFL28934.1
Conserved hypothetical protein.
  
     0.434
EFL24955.1
Conserved hypothetical protein.
  
     0.427
EFL27959.1
Conserved hypothetical protein.
  
     0.423
EFL25152.1
Oxidoreductase.
  
     0.416
EFL28606.1
Conserved hypothetical protein.
  
     0.416
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.