STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
smdDDNA-binding response regulator TcrA. (234 aa)    
Predicted Functional Partners:
smdC
Sensor histidine kinase.
 
 0.988
EFL22809.1
Sensor histidine kinase/response regulator.
  
 0.987
EFL27138.1
Sensor histidine kinase/response regulator.
 
0.982
EFL22717.1
Histidine kinase.
 
 0.914
EFL25454.1
Signal transduction histidine-protein kinase afsQ2; Truncated CDS; unextendable partial coding region.
  
 0.909
EFL25123.1
Putative signal transduction histidine kinase.
 0.904
EFL20857.1
Sensor histidine kinase.
 
 0.899
EFL28920.1
DNA-binding response regulator PrrA.
  
 0.883
EFL21245.1
Signal transduction histidine kinase.
 
 0.878
EFL26535.1
Sensor histidine kinase TcrS.
 
 0.877
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.