Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL22153.1Hypothetical protein. (90 aa)    
Predicted Functional Partners:
EFL22152.1
Hypothetical protein.
       0.882
EFL22154.1
3-oxoacyl-(acyl-carrier-protein) synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
       0.882
EFL22155.1
LigA protein.
       0.882
EFL22157.1
Conserved hypothetical protein.
       0.882
EFL22151.1
Putative acyl-CoA ligase.
       0.825
EFL22156.1
Putative AMP-binding enzyme.
       0.803
EFL22149.1
Fructose-bisphosphate aldolase.
       0.690
EFL22150.1
3-dehydroquinate synthase.
       0.690
EFL24619.1
dTDP-glucose 4,6-dehydratase.
       0.433
EFL22148.1
Flavodoxin/nitric oxide synthase.
       0.405
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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