STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22158.1ROK family transcriptional regulator. (418 aa)    
Predicted Functional Partners:
EFL23765.1
PTS system, fructose-specific family, IIABC component.
    
 0.802
EFL25612.1
PTS system, fructose-specific IIABC component.
    
 0.802
EFL25170.1
Glucokinase; Unextendable partial coding region.
  
     0.773
EFL25731.1
PTS system, N-acetylglucosamine-specific IIBC component.
  
 0.666
EFL25730.1
PTS system n-acetylglucosamine-specific EIICBA component.
   
 0.665
EFL23520.1
Polyphosphate-glucose phosphotransferase.
  
  
 0.661
EFL26429.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
  
 0.602
EFL20953.1
crp/Fnr family transcriptional regulator.
    
 0.595
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
 
  
 0.562
EFL28661.1
Vegetative cell wall protein gp1 (Hydroxyproline-rich glycoprotein 1); Unextendable partial coding region.
  
  
  0.541
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.