Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EFL22161.1Oligopeptide ABC transporter, permease. (317 aa)    
Predicted Functional Partners:
EFL28050.1
Peptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.984
EFL28366.1
Peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein.
 
 0.976
EFL22160.1
Putative ABC peptide transporter, substrate-binding component.
 
  0.967
EFL23478.1
Peptide ABC transporter, permease.
 
 0.936
EFL23488.1
Oligopeptide ABC transporter, permease OppC.
 
 0.936
EFL22162.1
Putative oligopeptide/dipeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.923
EFL29173.1
Oligopeptide ABC transporter, permease.
 
 0.916
EFL20524.1
Dipeptide ABC transporter, permease DppC.
 
 0.915
EFL20535.1
ABC transporter, permease.
 
 0.914
EFL21030.1
Putative ABC transporter, permease protein.
 
 0.908
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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