STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22170.1Rieske family iron-sulfur cluster-binding protein. (111 aa)    
Predicted Functional Partners:
EFL28296.1
Ring hydroxylating beta subunit family protein.
 
 0.865
EFL21194.1
Biphenyl 2,3-dioxygenase, beta subunit.
  
 0.831
EFL29030.1
Benzoate 1,2-dioxygenase, small subunit.
  
 0.831
EFL29245.1
Phenoxybenzoate dioxygenase subunit alpha (4-carboxydiphenyl ether;phenoxybenzoate dioxygenase).
  
     0.738
EFL20406.1
FAD dependent oxidoreductase/aminomethyl transferase; Belongs to the GcvT family.
  
 
  0.709
EFL21418.1
FAD dependent oxidoreductase/aminomethyl transferase; Belongs to the GcvT family.
  
 
  0.709
EFL23862.1
FAD dependent oxidoreductase.
  
 
  0.709
EFL24641.1
phenylacetate-CoA oxygenase/reductase, PaaK subunit.
  
 
 0.709
EFL29029.1
Benzoate dioxygenase, ferredoxin reductase component.
  
 
 0.706
EFL26378.1
Putative iron-sulfur oxidoreductase.
  
 
 0.692
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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