STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22171.1Arginine 2-monooxygenase. (492 aa)    
Predicted Functional Partners:
arcA
Arginine deiminase.
    
 0.917
EFL26538.1
Probable ArgI2 arginase; Belongs to the arginase family.
    
 0.911
EFL21932.1
Argininosuccinate lyase; Truncated CDS.
     
 0.901
EFL23269.1
Agmatinase; Belongs to the arginase family.
 
  
 0.855
EFL25935.1
Agmatinase; Belongs to the arginase family.
 
  
 0.854
EFL26369.1
Argininosuccinate lyase.
     
 0.747
EFL22170.1
Rieske family iron-sulfur cluster-binding protein.
       0.651
EFL24448.1
Spermidine synthase.
     
 0.640
EFL23202.1
Putative pyridoxal-dependent decarboxylase, C- sheet domain protein.
    
 0.634
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
    
 0.634
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.