STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22177.1Putative transcriptional regulator, TetR family. (190 aa)    
Predicted Functional Partners:
EFL22176.1
Hypothetical protein.
       0.741
EFL22178.1
Hypothetical protein.
       0.648
EFL22179.1
Conserved domain protein.
       0.583
EFL27930.1
Putative transcriptional regulator.
  
     0.438
EFL27931.1
Putative transcriptional regulator.
  
     0.415
EFL20335.1
TetR family transcriptional regulator.
  
     0.410
EFL22180.1
Putative secreted protein; Belongs to the glycosyl hydrolase 43 family.
       0.405
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.