STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22181.1Putative mucin-2 (MUC-2) (Intestinal mucin-2). (302 aa)    
Predicted Functional Partners:
EFL29200.1
Translation initiation factor IF-2.
  
     0.634
EFL22182.1
Methionine biosynthesis MetW; Belongs to the glycosyl hydrolase 43 family.
       0.576
EFL20346.1
LigA protein.
  
     0.554
EFL29352.1
Leucine rich repeat variant (3 repeats).
  
     0.552
EFL28536.1
LigA protein.
  
    0.543
EFL28538.1
Putative OmpA/MotB.
  
     0.519
EFL22183.1
alpha-N-arabinofuranosidase (Arabinosidase).
 
     0.507
EFL24758.1
Putative secreted protein.
  
     0.443
EFL24501.1
Putative membrane protein.
  
     0.438
EFL22372.1
Putative transposase for insertion sequence element.
  
     0.425
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.