STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22183.1alpha-N-arabinofuranosidase (Arabinosidase). (432 aa)    
Predicted Functional Partners:
EFL22182.1
Methionine biosynthesis MetW; Belongs to the glycosyl hydrolase 43 family.
 
 
 0.917
EFL22191.1
Putative ricin-type beta-trefoil lectin domain protein.
  
  
  0.756
EFL27683.1
Glycosyl hydrolase family 62.
 
     0.722
EFL26412.1
alpha-N-arabinofuranosidase.
     
 0.713
EFL28850.1
alpha-N-arabinofuranosidase 1 (Alpha-N-arabinofuranosidase I) (Arabinosidase I) (Alpha-N-AFase I).
     
 0.713
EFL26410.1
Conserved hypothetical protein.
  
     0.679
EFL21657.1
Endo-1,4-beta-xylanase A (Xylanase A) (1,4-beta-D-xylanohydrolase A).
  
  
  0.666
EFL28976.1
Conserved hypothetical protein.
  
  
 0.666
EFL22184.1
GntR-family transcriptional regulator.
 
     0.663
EFL26282.1
Glycosyl hydrolase family 10.
 
  
 0.658
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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