STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22185.1Conserved hypothetical protein. (643 aa)    
Predicted Functional Partners:
EFL22186.1
Conserved hypothetical protein.
 
     0.904
EFL22585.1
Putative conjugal transfer protein.
  
     0.651
EFL22189.1
alpha-L-fucosidase.
  
     0.629
EFL25259.1
Putative regulatory protein.
  
     0.620
EFL22191.1
Putative ricin-type beta-trefoil lectin domain protein.
  
     0.542
EFL20867.1
Mucin; Tracheobronchial mucin.
  
     0.504
EFL22457.1
Putative alpha-L-fucosidase.
  
     0.478
EFL23866.1
Conserved hypothetical protein.
  
     0.459
EFL23022.1
Conserved hypothetical protein.
  
     0.458
EFL20866.1
exo-poly-alpha-D-galacturonosidase; Belongs to the glycosyl hydrolase 28 family.
  
     0.453
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.