STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22189.1alpha-L-fucosidase. (660 aa)    
Predicted Functional Partners:
EFL21448.1
alpha-L-fucosidase 2 (Alpha-L-fucosidefucohydrolase 2) (Alpha-1,2-fucosidase 2).
 
 
  0.967
EFL26101.1
Conserved hypothetical protein.
 
  
  0.963
EFL20867.1
Mucin; Tracheobronchial mucin.
  
  
  0.945
EFL29292.1
alpha-L-fucosidase 2 (Alpha-L-fucosidefucohydrolase 2) (Alpha-1,2-fucosidase 2).
  
  
  0.919
EFL22190.1
Galactocerebrosidase.
 
     0.876
EFL22191.1
Putative ricin-type beta-trefoil lectin domain protein.
 
 
  0.836
EFL22345.1
Conserved hypothetical protein.
  
  
  0.780
EFL22186.1
Conserved hypothetical protein.
  
     0.754
EFL20593.1
Glycosyl hydrolase family 20, catalytic domain protein.
 
  
 0.706
EFL22457.1
Putative alpha-L-fucosidase.
  
  
 
0.685
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.