STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22191.1Putative ricin-type beta-trefoil lectin domain protein. (599 aa)    
Predicted Functional Partners:
EFL22189.1
alpha-L-fucosidase.
 
 
  0.836
EFL24877.1
Non-specific serine/threonine protein kinase.
   
 0.773
EFL22183.1
alpha-N-arabinofuranosidase (Arabinosidase).
  
  
  0.756
EFL22186.1
Conserved hypothetical protein.
  
     0.741
EFL20953.1
crp/Fnr family transcriptional regulator.
  
 
 0.707
EFL21102.1
Leupeptin-inactivating enzyme 1 (LIE1).
   
 0.694
EFL25037.1
Cellulase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
 
  0.678
EFL25892.1
Putative endo-1,4-beta-glucanase.
  
 
  0.664
EFL22190.1
Galactocerebrosidase.
 
  
 
0.640
EFL27590.1
Putative cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
 
  0.638
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.