STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22202.1Putative isomerase. (298 aa)    
Predicted Functional Partners:
EFL22201.1
Conserved hypothetical protein.
     0.990
EFL22200.1
TatD family hydrolase.
 
  
 0.958
EFL22199.1
AP endonuclease, family 2.
 
     0.957
EFL22198.1
Type I phosphodiesterase/nucleotide pyrophosphatase.
 
     0.904
EFL22203.1
Putative secreted protein.
 
     0.903
EFL22204.1
crp/Fnr family transcriptional regulator.
 
   
 0.898
EFL22197.1
AP endonuclease, family 2.
 
     0.812
EFL21313.1
Hydroxypyruvate isomerase; Belongs to the hyi family.
 
  
  0.785
EFL21315.1
Glyoxylate carboligase; Belongs to the TPP enzyme family.
    
  0.784
EFL20953.1
crp/Fnr family transcriptional regulator.
 
   
 0.760
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.