STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22212.1GntR-family transcriptional regulator. (225 aa)    
Predicted Functional Partners:
EFL25775.1
Transcriptional regulator, GntR-family.
  
  
 0.765
EFL26418.1
GntR family transcriptional regulator.
  
  
 0.760
EFL21333.1
L-asparagine operon repressor (GntR family); Truncated CDS.
  
  
 0.746
EFL21202.1
GntR family transcriptional regulator.
  
  
 0.741
EFL27581.1
GntR family transcriptional regulator.
  
  
 0.741
EFL22748.1
Sporulation transcription factor, WhiH.
  
  
 0.718
EFL28902.1
Regulatory protein GntR, HTH.
  
  
 0.709
EFL27183.1
GntR family transcriptional regulator; Truncated CDS.
  
  
 0.705
EFL28834.1
GntR family transcriptional regulator.
  
  
 0.682
EFL27370.1
GntR family transcriptional regulator.
  
  
 0.626
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.