STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22226.1LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (288 aa)    
Predicted Functional Partners:
EFL24867.1
Nitrogen assimilation regulatory protein; Belongs to the LysR transcriptional regulatory family.
  
     0.693
EFL28254.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.684
EFL22225.1
Bile acid/Na+ symporter family transporter.
 
    0.663
EFL20751.1
Probable transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.651
EFL23817.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.649
EFL20383.1
Putative LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.633
EFL20511.1
Transcriptional regulator LysR family protein; Belongs to the LysR transcriptional regulatory family.
  
     0.583
EFL27167.1
LysR family transcriptional regulator; Unextendable partial coding region; Belongs to the LysR transcriptional regulatory family.
  
     0.574
EFL26617.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.537
EFL29055.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.525
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.