STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22238.1Amine oxidase, flavin-containing; Truncated CDS. (424 aa)    
Predicted Functional Partners:
EFL22237.1
Cyclopropane-fatty-acyl-phospholipid synthase.
  
 0.997
EFL22236.1
Cyclopropane-fatty-acyl-phospholipid synthase; Truncated CDS.
 
  
 0.964
EFL22235.1
Conserved hypothetical protein.
 
    0.958
EFL25522.1
Cyclopropane-fatty-acyl-phospholipid synthase.
  
 0.908
EFL28107.1
Cyclopropane-fatty-acyl-phospholipid synthase.
  
 0.744
EFL22234.1
Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family.
 
   
 0.566
EFL22233.1
Membrane protein.
 
   
 0.559
EFL22239.1
Putative pterin-4-alpha-carbinolamine dehydratase (PHS)(4-alpha-hydroxy-tetrahydropterin dehydratase) (Pterin carbinolaminedehydratase) (PCD).
       0.535
EFL22232.1
RNA polymerase sigma-70 factor, ECF subfamily.
 
  
 0.534
EFL25448.1
Conserved hypothetical protein.
 
     0.534
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.