STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22252.1Conserved hypothetical protein. (218 aa)    
Predicted Functional Partners:
EFL22254.1
Putative LigA.
 
     0.937
EFL22255.1
Putative vgr-related protein.
 
     0.920
EFL22253.1
Putative acyl carrier protein.
       0.793
EFL24970.1
Putative transcriptional regulator, LacI family; Belongs to the 'phage' integrase family.
  
     0.530
EFL22259.1
Conserved hypothetical protein.
  
     0.524
EFL22244.1
Pyridoxamine 5-phosphate oxidase.
  
     0.498
EFL22247.1
Putative long-chain acyl-CoA synthetase.
 
     0.498
EFL24398.1
Putative regulatory protein.
  
     0.438
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.