Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFL22254.1Putative LigA. (510 aa)    
Predicted Functional Partners:
EFL22255.1
Putative vgr-related protein.
 
  
  0.956
EFL22252.1
Conserved hypothetical protein.
 
     0.936
EFL24122.1
Ferredoxin oxidoreductase, alpha subunit.
    
 0.812
EFL22253.1
Putative acyl carrier protein.
    
  0.794
EFL22247.1
Putative long-chain acyl-CoA synthetase.
 
   
 0.773
EFL22257.1
Non-ribosomal peptide synthetase.
  
     0.737
EFL22244.1
Pyridoxamine 5-phosphate oxidase.
  
     0.736
EFL22248.1
Methyltransferase domain protein.
  
     0.719
EFL24970.1
Putative transcriptional regulator, LacI family; Belongs to the 'phage' integrase family.
  
     0.718
EFL27601.1
Polyketide synthase; Truncated CDS.
  
 
 0.709
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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