STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22264.1Conserved hypothetical protein. (331 aa)    
Predicted Functional Partners:
EFL24683.1
Soj family protein.
  
 
 0.880
EFL27220.1
Soj family protein.
  
 
 0.880
rsmG
16S rRNA methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
  
 0.830
EFL24545.1
Conserved hypothetical protein.
    
 
 0.746
EFL25923.1
PE-PGRS family protein.
  
     0.612
EFL22263.1
Anthranilate synthase, phenazine specific.
 
   
 0.605
EFL23245.1
Homoserine dehydrogenase.
    
 0.584
EFL22809.1
Sensor histidine kinase/response regulator.
     
 0.568
EFL26981.1
Putative secreted protein.
  
     0.564
EFL21268.1
Conserved hypothetical protein.
  
     0.561
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.