STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22266.1Putative ABC transporter permease protein. (466 aa)    
Predicted Functional Partners:
EFL22267.1
Putative membrane protein.
    
  0.857
arcA
Arginine deiminase.
 
  
 0.642
EFL22681.1
Homocysteine S-methyltransferase.
       0.572
nadE
Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
   
 0.565
EFL22297.1
Conserved hypothetical protein.
       0.560
EFL28118.1
Putative amino acid permease.
  
     0.546
EFL22268.1
Hypothetical protein.
       0.472
EFL22265.1
Cytochrome P450 107B1 (P450CVIIB1).
  
  0.464
EFL22298.1
Putative integral membrane protein.
       0.444
EFL24562.1
Putative membrane protein.
    
 0.434
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.