Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL22278.1Conserved hypothetical protein. (144 aa)    
Predicted Functional Partners:
EFL22277.1
TetR family transcriptional regulator.
 
     0.660
EFL22347.1
methylmalonyl-CoA mutase.
     
  0.647
EFL25378.1
Conserved hypothetical protein.
  
     0.563
EFL22484.1
Conserved hypothetical protein.
  
     0.532
EFL22026.1
Chitosanase; Aids in the defense against invading fungal pathogens by degrading their cell wall chitosan.
  
     0.531
EFL22094.1
Vegetative cell wall protein gp1 (Hydroxyproline-rich glycoprotein 1).
 
     0.499
EFL26440.1
LigA protein.
  
     0.492
EFL23895.1
Putative transcriptional regulator, MerR family.
  
     0.491
EFL28199.1
Conserved hypothetical protein.
  
     0.485
EFL23322.1
Extracellular small neutral protease (Snapalysin) (Extracellular metalloprotease); Belongs to the peptidase M7 family.
  
     0.484
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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