STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22281.1Putative toxin-antitoxin system, toxin component. (80 aa)    
Predicted Functional Partners:
EFL22280.1
Xre family toxin-antitoxin system, antitoxin component.
 
     0.866
EFL22165.1
Putative toxin-antitoxin system, toxin component; Overlaps another CDS with the same product name.
  
     0.693
EFL21088.1
Conserved hypothetical protein.
  
     0.642
EFL24449.1
Conserved hypothetical protein.
  
     0.590
EFL24569.1
Conserved hypothetical protein.
  
     0.572
EFL22279.1
Putative regulatory protein.
       0.562
EFL26077.1
Putative membrane protein.
  
     0.548
EFL21663.1
LigA protein; Overlaps another CDS with the same product name.
  
     0.540
EFL27252.1
Putative regulator.
  
     0.487
EFL29287.1
Conserved hypothetical protein.
  
     0.449
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.