Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EFL22290.1Putative TetR-family transcriptional regulator. (236 aa)    
Predicted Functional Partners:
EFL22291.1
Putative oxidoreductase.
 
     0.706
EFL20725.1
Tetracycline repressor protein class D.
  
     0.574
EFL25395.1
Tetracycline repressor protein class D.
  
     0.542
EFL26336.1
Putative TetR-family transcriptional regulator.
  
     0.520
EFL26409.1
Putative monooxygenase.
 
     0.497
EFL27063.1
Putative monooxygenase.
 
     0.495
EFL24884.1
Winged helix family transcriptional regulator.
  
    0.485
EFL23001.1
Pas:ggdef.
  
  
 0.482
EFL20415.1
Putative transcriptional regulator.
  
    0.478
EFL21745.1
Sensory box/GGDEF family protein.
  
  
 0.462
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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