STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22293.1Cupin domain protein. (142 aa)    
Predicted Functional Partners:
EFL22292.1
Secreted protein.
 
     0.925
EFL22295.1
GNAT family acetyltransferase.
 
  
  0.568
EFL20552.1
Putative cupin domain protein.
  
     0.534
EFL22321.1
Catalase HPII.
    
  0.531
EFL27300.1
Putative tetratricopeptide repeat protein.
  
     0.517
EFL22294.1
Transposase, OrfB.
       0.503
EFL27365.1
ABC transporter, carbohydrate uptake transporter-2 (CUT2) family, periplasmic sugar-binding protein.
  
     0.467
EFL22412.1
3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase.
    
 0.430
EFL26258.1
3-oxoadipate enol-lactonase.
    
 0.430
EFL23866.1
Conserved hypothetical protein.
  
     0.401
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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