Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL22298.1Putative integral membrane protein. (209 aa)    
Predicted Functional Partners:
EFL22297.1
Conserved hypothetical protein.
 
     0.900
EFL22267.1
Putative membrane protein.
     0.829
EFL26509.1
Putative integral membrane protein.
  
     0.674
EFL26390.1
Hydroperoxide resistance protein OsmC.
       0.572
EFL28418.1
Putative membrane protein.
  
  
 0.546
EFL21424.1
Conserved hypothetical protein.
  
     0.484
EFL24851.1
Putative membrane protein.
  
     0.456
EFL22809.1
Sensor histidine kinase/response regulator.
     
 0.447
EFL22266.1
Putative ABC transporter permease protein.
       0.444
EFL24456.1
Putative ABC transport system integral membrane protein.
  
    0.433
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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