STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22313.1Conserved hypothetical protein. (107 aa)    
Predicted Functional Partners:
EFL26930.1
Glutamate synthase large subunit.
    
 0.936
EFL23292.1
Oxoglutarate dehydrogenase (succinyl-transferring), E1 component.
   
 0.915
EFL24122.1
Ferredoxin oxidoreductase, alpha subunit.
    
 0.913
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
 0.910
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
  
 0.910
EFL25087.1
L-aspartate oxidase (LASPO) (Quinolinate synthetase B).
  
 
 0.909
EFL24725.1
Cys/Met metabolism PLP-dependent enzyme family protein.
  
 
 0.907
EFL24905.1
Aspartate kinase, monofunctional class; Belongs to the aspartokinase family.
  
 0.907
EFL25055.1
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
  
 
 0.905
EFL25238.1
Citrate (Si)-synthase; Belongs to the citrate synthase family.
  
 
 0.905
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.