STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22326.1UbiE/COQ5 family methyltransferase. (275 aa)    
Predicted Functional Partners:
EFL21377.1
Glycine dehydrogenase; Truncated CDS; Belongs to the GcvP family.
 
   
 0.881
EFL21630.1
Non-ribosomal peptide synthetase.
    
 0.786
EFL27601.1
Polyketide synthase; Truncated CDS.
   
 0.749
EFL22327.1
Conserved hypothetical protein.
       0.716
EFL28177.1
Linear gramicidin synthetase LgrC.
    
 0.663
EFL28178.1
Non-ribosomal peptide synthetase; Unextendable partial coding region.
    
 0.663
EFL28179.1
Putative phosphopantetheine attachment site; Unextendable partial coding region.
    
 0.663
EFL20406.1
FAD dependent oxidoreductase/aminomethyl transferase; Belongs to the GcvT family.
     
 0.653
EFL21418.1
FAD dependent oxidoreductase/aminomethyl transferase; Belongs to the GcvT family.
     
 0.653
EFL23862.1
FAD dependent oxidoreductase.
     
 0.653
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.