STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22333.1Putative transport associated protein. (277 aa)    
Predicted Functional Partners:
EFL22331.1
S9C (acylaminoacyl-peptidase) family peptidase.
 
     0.905
EFL22332.1
Putative peptidase family M20/M25/M40 protein.
 
     0.903
EFL22334.1
Methyltransferase domain protein.
       0.885
EFL22335.1
Putative integral membrane sensor protein.
       0.806
EFL22338.1
KanY protein.
       0.684
EFL22339.1
Putative radical SAM domain protein.
       0.665
EFL22328.1
Putative ribosomal-protein-alanine N-acetyltransferase.
       0.605
EFL22330.1
4'-phosphopantetheinyltransferase; Belongs to the P-Pant transferase superfamily.
       0.534
EFL26077.1
Putative membrane protein.
  
     0.491
EFL27425.1
Putative transport system permease protein.
  
  
 0.466
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.