STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22334.1Methyltransferase domain protein. (255 aa)    
Predicted Functional Partners:
EFL22333.1
Putative transport associated protein.
       0.877
EFL22332.1
Putative peptidase family M20/M25/M40 protein.
       0.868
EFL22331.1
S9C (acylaminoacyl-peptidase) family peptidase.
       0.842
EFL22335.1
Putative integral membrane sensor protein.
       0.788
EFL27991.1
Conserved hypothetical protein.
  
     0.664
EFL23603.1
Putative regulatory protein.
  
     0.568
EFL20532.1
Putative tetratricopeptide repeat protein.
  
     0.519
EFL28194.1
Conserved hypothetical protein.
  
     0.511
EFL22400.1
Collagen alpha-1(III) chain.
  
     0.502
EFL22330.1
4'-phosphopantetheinyltransferase; Belongs to the P-Pant transferase superfamily.
       0.493
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.