STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22353.1Glycerate kinase. (329 aa)    
Predicted Functional Partners:
EFL20389.1
D-isomer specific 2-hydroxyacid dehydrogenase.
    
 0.881
EFL21314.1
2-hydroxy-3-oxopropionate reductase.
  
 
 0.865
gpmA
Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
     
 0.861
EFL25473.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
 0.856
EFL22354.1
ADP-ribosylglycohydrolase superfamily protein.
       0.786
EFL26416.1
Putative 3-hydroxybutyrate dehydrogenase.
  
 
 0.711
EFL26572.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
 0.708
EFL28053.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
 0.708
EFL22758.1
Putative phosphoglycerate mutase family protein; Unextendable partial coding region.
     
 0.657
EFL23354.1
Phosphoglycerate mutase.
     
 0.657
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.