STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22375.1P49 protein. (479 aa)    
Predicted Functional Partners:
EFL20343.1
Putative mucin-2 (MUC-2) (Intestinal mucin-2); truncated CDS; Belongs to the FPP/GGPP synthase family.
  
 
 0.801
EFL22054.1
Squalene synthase HpnD.
  
 
 0.784
EFL22055.1
Squalene synthase HpnC.
  
 
 0.784
EFL20373.1
Putative type I polyketide synthase WcbR.
  
 
 0.709
EFL22376.1
Inositol monophosphatase.
       0.693
EFL27123.1
Subunit D/I family magnesium chelatase.
  
 
 0.663
EFL27124.1
Putative magnesium chelatase; Unextendable partial coding region.
  
 
 0.663
EFL28340.1
Short-chain dehydrogenase/reductase family oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.633
EFL22363.1
methylated-DNA-protein-cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.
       0.605
EFL23591.1
Histone macro-H2A1-related protein.
       0.605
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.