STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22384.1Putative transcriptional regulator. (333 aa)    
Predicted Functional Partners:
EFL22385.1
Short chain dehydrogenase/reductase family oxidoreductase.
 
     0.757
EFL22377.1
Transketolase, N- subunit.
 
     0.699
EFL22383.1
Ribose ABC transporter, ATP-binding protein.
  
  
 0.670
EFL22378.1
Transketolase, C- subunit.
 
     0.667
EFL22382.1
Ribose ABC transporter, periplasmic ribose-binding protein.
  
  
 0.635
EFL21480.1
PTS system enzyme I.
  
  
  0.617
EFL22379.1
Glycerol kinase; Belongs to the FGGY kinase family.
     
 0.518
gpsA
Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
    
  0.513
EFL21478.1
Dihydroxyacetone kinase, DhaK subunit.
  
  0.497
EFL28904.1
Dihydroxyacetone kinase.
  
  0.449
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.