STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL22389.1ROK family transcriptional regulator. (421 aa)    
Predicted Functional Partners:
EFL25170.1
Glucokinase; Unextendable partial coding region.
  
     0.773
EFL23765.1
PTS system, fructose-specific family, IIABC component.
    
 0.766
EFL25612.1
PTS system, fructose-specific IIABC component.
    
 0.766
EFL25731.1
PTS system, N-acetylglucosamine-specific IIBC component.
  
 0.656
EFL25730.1
PTS system n-acetylglucosamine-specific EIICBA component.
  
 0.654
EFL23520.1
Polyphosphate-glucose phosphotransferase.
  
  
 0.644
EFL22388.1
Oxidoreductase family, NAD-binding Rossmann fold domain protein.
 
     0.642
EFL22387.1
Sugar phosphate isomerase/epimerase.
 
  
  0.599
EFL21385.1
Mannose-1-phosphate guanyltransferase.
  
 
 0.558
EFL26429.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
  
 0.551
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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