STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22390.1Probable oxidoreductase protein. (374 aa)    
Predicted Functional Partners:
EFL22386.1
Sugar phosphate isomerase/epimerase.
 
 
  0.832
EFL22387.1
Sugar phosphate isomerase/epimerase.
 
 
  0.758
EFL20475.1
NADH-dependent dehydrogenase; Overlaps another CDS with the same product name.
  
     0.754
EFL28818.1
Putative myo-inositol 2-dehydrogenase.
 
     0.747
EFL23973.1
Lipopolysaccharide biosynthesis protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
 
 0.730
EFL21936.1
Probable NDP-hexose-3-ketoreductase.
  
     0.729
EFL20504.1
Oxidoreductase family, NAD-binding Rossmann fold domain protein.
  
     0.711
EFL27466.1
Putative virulence factor MviM.
  
     0.710
EFL27465.1
RIO1 family protein.
  
 
  0.657
EFL22163.1
LigA protein.
 
 
  0.642
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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