Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EFL22407.1Glutamate transport ATP-binding protein. (248 aa)    
Predicted Functional Partners:
EFL22404.1
Glutamate transport system permease GluD.
 
 0.999
EFL22405.1
Glutamate permease.
 
 0.999
EFL22406.1
Putative glutamate periplasmic binding protein.
 
 0.984
EFL22786.1
Glutamate permease; Overlaps another CDS with the same product name.
 
 0.970
EFL22785.1
Glutamate permease; Overlaps another CDS with the same product name.
 
 0.969
EFL28978.1
His/Glu/Gln/Arg/opine family amino acid ABC transporter, permease.
 0.942
EFL20468.1
His/Glu/Gln/Arg/opine family amino acid ABC transporter, permease.
 0.938
EFL22784.1
Glutamate-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
 0.937
EFL21396.1
Amino acid ABC transporter, permease.
 
 0.932
EFL21707.1
Amino acid ABC transporter, permease PEB1.
 
 0.932
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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