Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EFL22408.1Conserved hypothetical protein. (146 aa)    
Predicted Functional Partners:
EFL22406.1
Putative glutamate periplasmic binding protein.
       0.614
EFL22407.1
Glutamate transport ATP-binding protein.
       0.614
EFL22404.1
Glutamate transport system permease GluD.
       0.607
EFL22405.1
Glutamate permease.
       0.607
EFL22410.1
Exodeoxyribonuclease III.
       0.572
EFL22411.1
Metallo-beta-lactamase superfamily protein.
       0.572
EFL22409.1
Putative secreted protein.
       0.511
EFL22413.1
Probable secreted protein.
       0.454
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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