Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EFL22409.1Putative secreted protein. (577 aa)    
Predicted Functional Partners:
EFL26282.1
Glycosyl hydrolase family 10.
 
 0.879
EFL28409.1
Putative pectinesterase/pectate lyase protein.
 
  
 0.649
EFL27682.1
Endo-1,4-beta-xylanase A (Xylanase A) (1,4-beta-D-xylanohydrolase A).
  
 
  0.560
EFL27212.1
Putative glycosyl hydrolase.
  
 
  0.529
EFL22408.1
Conserved hypothetical protein.
       0.511
EFL23090.1
Putative secreted lyase.
  
  0.502
EFL23091.1
Putative secreted lyase.
  
  0.501
EFL28136.1
Feruloyl esterase B (Ferulic acid esterase B)(FAEB) (Cinnamoyl esterase).
 
 0.485
EFL24601.1
Conserved hypothetical protein.
  
  0.474
EFL21657.1
Endo-1,4-beta-xylanase A (Xylanase A) (1,4-beta-D-xylanohydrolase A).
  
     0.440
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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