STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22435.1Guanyl-specific ribonuclease Sa3 (RNase Sa3). (135 aa)    
Predicted Functional Partners:
EFL20346.1
LigA protein.
  
 
 0.973
EFL22436.1
Putative DNA-binding protein.
       0.775
EFL21782.1
IMP dehydrogenase.
       0.605
EFL21783.1
Putative transcriptional regulator.
       0.605
EFL28890.1
Riboflavin biosynthesis, RibD domain-containing protein.
       0.597
EFL20901.1
D-(-)-3-hydroxybutyrate oligomer hydrolase (3HB-oligomer hydrolase) (3HBOH).
  
     0.553
EFL27248.1
Putative integral membrane protein.
  
     0.480
EFL22433.1
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase.
       0.464
EFL22437.1
Hypothetical protein.
       0.459
EFL22434.1
2-dehydro-3-deoxygluconokinase.
       0.447
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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