STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22436.1Putative DNA-binding protein. (199 aa)    
Predicted Functional Partners:
EFL22435.1
Guanyl-specific ribonuclease Sa3 (RNase Sa3).
       0.775
EFL27833.1
DNA-binding protein.
  
 
  0.775
EFL22437.1
Hypothetical protein.
       0.773
EFL22047.1
Aminotransferase, class III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.605
EFL22049.1
Hopanoid biosynthesis associated radical SAM protein HpnH.
       0.605
EFL22051.1
Squalene-hopene cyclase.
       0.605
EFL20490.1
GNAT family acetyltransferase.
    
  0.579
EFL22438.1
Conserved hypothetical protein.
       0.542
EFL22321.1
Catalase HPII.
    
  0.541
EFL21160.1
cro/CI family transcriptional regulator.
 
0.526
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.