Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL22484.1Conserved hypothetical protein. (102 aa)    
Predicted Functional Partners:
EFL22485.1
TetR family transcriptional regulator.
 
     0.865
EFL28743.1
PE-PGRS family protein; Unextendable partial coding region.
  
     0.604
EFL26538.1
Probable ArgI2 arginase; Belongs to the arginase family.
       0.572
EFL21506.1
Conserved hypothetical protein.
  
     0.553
EFL22486.1
Daunorubicin resistance ATP-binding protein DrrA.
       0.553
EFL22278.1
Conserved hypothetical protein.
  
     0.532
EFL23516.1
LigA protein.
  
     0.522
EFL22487.1
Putative ABC transporter, integral membrane subunit.
       0.498
EFL24521.1
LigA protein.
  
     0.492
EFL23022.1
Conserved hypothetical protein.
  
     0.477
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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