STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22490.1Antibiotic biosynthesis monooxygenase subfamily. (100 aa)    
Predicted Functional Partners:
EFL22489.1
L-sulfolactate dehydrogenase ((R)-sulfolactatedehydrogenase); Belongs to the LDH2/MDH2 oxidoreductase family.
 
     0.896
EFL28004.1
Extensin (Proline-rich glycoprotein).
 
  
 0.671
EFL22488.1
GntR family transcriptional regulator.
       0.530
EFL22491.1
PE-PGRS family protein.
    
  0.517
EFL22412.1
3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase.
  
 
  0.475
EFL26258.1
3-oxoadipate enol-lactonase.
  
 
  0.475
EFL22149.1
Fructose-bisphosphate aldolase.
  
  
 0.465
EFL26008.1
Deoxyribose-phosphate aldolase.
  
  
 0.465
EFL27947.1
Fructose-bisphosphate aldolase.
  
  
 0.465
EFL22487.1
Putative ABC transporter, integral membrane subunit.
       0.464
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.