Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EFL22542.1Putative ABC transport system integral membrane protein. (855 aa)    
Predicted Functional Partners:
EFL22541.1
Putative ABC transporter, ATP-binding protein; Truncated CDS; unextendable partial coding region.
 
 
 0.931
EFL24456.1
Putative ABC transport system integral membrane protein.
 
 
0.791
EFL23681.1
Putative ABC transporter, ATP-binding protein.
 
 
 0.734
EFL25524.1
Putative ABC transporter, ATP-binding protein.
 
 
 0.728
EFL21119.1
Putative ABC transporter, ATP-binding protein.
 
 
 0.726
EFL22540.1
PE-PGRS family protein.
 
    
0.677
EFL21627.1
Putative ABC transporter, ATP-binding protein.
 
 
 0.625
EFL28400.1
Putative ABC transporter, ATP-binding protein.
 
 
 0.625
EFL26122.1
Putative ABC transporter, ATP-binding protein.
 
 
 0.559
EFL28615.1
Putative ABC transporter, ATP-binding protein.
 
 
 0.551
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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