STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22543.1Putative radical SAM domain protein; Overlaps another CDS with the same product name. (384 aa)    
Predicted Functional Partners:
EFL22545.1
Conserved hypothetical protein.
 
  
 0.921
EFL22544.1
Putative radical SAM domain protein; Overlaps another CDS with the same product name.
 
    
0.856
EFL22400.1
Collagen alpha-1(III) chain.
  
 
  0.791
EFL26320.1
Conserved hypothetical protein.
  
     0.772
EFL21165.1
Putative membrane protein.
  
     0.756
EFL25259.1
Putative regulatory protein.
  
     0.754
EFL23776.1
Putative secreted protein.
  
     0.750
EFL20532.1
Putative tetratricopeptide repeat protein.
 
     0.749
EFL23709.1
Putative secreted protein.
  
     0.748
EFL24995.1
Conserved hypothetical protein.
  
    0.745
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.