Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL22553.1Basic proline-rich protein. (569 aa)    
Predicted Functional Partners:
EFL22552.1
Conserved hypothetical protein.
 
     0.926
EFL22550.1
Putative adenylate cyclase.
 
 
  0.781
EFL22551.1
LigA protein.
       0.773
EFL26320.1
Conserved hypothetical protein.
  
     0.767
EFL22400.1
Collagen alpha-1(III) chain.
  
 
  0.755
EFL21165.1
Putative membrane protein.
  
     0.745
EFL25763.1
Conserved hypothetical protein.
  
     0.743
EFL24995.1
Conserved hypothetical protein.
  
     0.721
EFL22310.1
Putative secreted protein.
 
  
 0.720
EFL24454.1
Conserved hypothetical protein.
  
     0.720
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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