STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22554.1GntR family transcriptional regulator. (278 aa)    
Predicted Functional Partners:
EFL22555.1
ABC transporter, ATP-binding protein.
 
     0.865
EFL22731.1
Transcriptional regulator.
  
  
 0.767
EFL23908.1
Probable transcriptional regulator YdhC.
  
  
 0.763
EFL22488.1
GntR family transcriptional regulator.
  
  
 0.756
EFL24611.1
GntR-family transcriptional regulator.
  
  
 0.755
EFL26456.1
GntR family transcriptional regulator.
  
  
 0.755
EFL28362.1
GntR family transcriptional regulator.
  
  
 0.753
EFL20440.1
GntR family transcriptional regulator.
  
  
 0.748
EFL27092.1
Putative GntR-family transcriptional regulator.
  
  
 0.748
EFL22748.1
Sporulation transcription factor, WhiH.
  
     0.745
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.